Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929182.1_cds_XP_016476553.1_68377
CDS Infomation

[gene=LOC107798110] [db_xref=GeneID:107798110] [protein=glucan endo-1,3-beta-glucosidase 5-like] [protein_id=XP_016476553.1] [location=complement(join(99683..100844,102092..102441))] [gbkey=CDS]
Sequence

ATGGAACATTTTCACGTTCATCGTCACATCTTCTTGTGGATTTTGATCGTAACAGTCGTC
GAAAAAGGCTCAATTGCAGAGGGCATGGGCGTGAACTGGGGAACGCGGGCATCTCATCCG
CTACCACCAGACATCGTAGTGAAGCTGTTAAAAGAGAACGGATTCAACAAAGTGAAACTG
TTCGAAGCGGATGCAGGAGCGTTGAAGGCGCTGGGGAGATCAGGTATTCAGGTTATGGTT
GGAATACCTAATGACATGTTAGCATCATTGGCTAGCACTGTTCGTGCTGCTGAGGAATGG
GTGCAACAGAATGTTTCTTCCTTTATTTCCAAGAATGGCGTCGATATCAGGTATGTGGCA
GTCGGAAATGAGCCTTTTCTGAAAGCCTACAAAGACACATTCATTAAAACAACATTACCA
GCCTTAGAAAATGTGCAAGCAGCTCTTATTAAAGCAGGCTTAGGACGACAAGTCAAGATT
ACTGTTCCAATTAATGCAGATGTGTACCAAACAGACAGTGGAGTCCCTTCAGGTGGAAAT
TTCAGATCAGACATTCATGATCTCATGATGAAAATTGTCAAGTTCCTAAGTGACAATGGG
GGTCCTCTCACTATTAACATCTACCCTTTCCTTAGCCTGTACGCTGACCCTCATTTCCCA
ATTGACTTTGCCTTCTTCTCGGGCTCTTCCTCTCCAGTCGTGGACGGCTCCATCACGTAT
AACAATGTTTTCGAAGCTAATTATGATACCCTCGTTTGGGCTCTCGAGAAAAATGGTTTT
GGTTCGATGCCTATAATCGTAGGAGAAATCGGTTGGCCTACTGATGGTGATGCCAACGCA
AACATTGAATATGCTAGAAAGTTCAATCAAGGTCTACTAGACCGAATTAGTCGTGGTATA
GGTACCCCTAAACGGCCTACACCACCCGACATTTACATTTTCGGGCTCGTGGATGAAGAT
GCCAAGAGCATTGAACCGGGGAATTTCGAGCGCCATTGGGGAGTTTTTGCCTTTGATGGA
GCCATTAAATACCAACTTGATTTAGGTAACAATCGAAGTCTGACACCAGCTAAAGGCGTA
CGATATTTGGCTAGGAAATGGTGTATAATGGCACCTGAGGCAAATGTTATGGACCCGAGC
TTGCCAGAAAGTATAAATTATGCATGTAGCTACGCAGATTGCACTAGTCTTGGATATGGT
TCGTCATGTGGTGGACTTGACGTTAAGACCAACGCTTCATATGCCTTTAATATGTACTAT
CAAACTATGAATCAACAGAAAGGGTCGTGTGAAAGGTTTCATAATTTGTCGGTCATTACA
ACAATTGATCCATCTCCTAGTTCTTCAAGCAGGGGCAGCTCTTCTTCTTGTCGATTTGAG
ATAATGATTGATGTGGGTAGGCACCAGTCAAGGGCAAATCCAGGAACTTCTTCTGCTACA
AAGATCAAACATTTTTCTCTTCTTTTCTTTGTGCTAGCATTCGTAGTGGACTACTACATG
TCTCTGCCTTAG

Peptide Sequence

PEP ID

XP_016476553.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Nicotiana tabacum]
Sequence

MEHFHVHRHIFLWILIVTVVEKGSIAEGMGVNWGTRASHPLPPDIVVKLLKENGFNKVKL
FEADAGALKALGRSGIQVMVGIPNDMLASLASTVRAAEEWVQQNVSSFISKNGVDIRYVA
VGNEPFLKAYKDTFIKTTLPALENVQAALIKAGLGRQVKITVPINADVYQTDSGVPSGGN
FRSDIHDLMMKIVKFLSDNGGPLTINIYPFLSLYADPHFPIDFAFFSGSSSPVVDGSITY
NNVFEANYDTLVWALEKNGFGSMPIIVGEIGWPTDGDANANIEYARKFNQGLLDRISRGI
GTPKRPTPPDIYIFGLVDEDAKSIEPGNFERHWGVFAFDGAIKYQLDLGNNRSLTPAKGV
RYLARKWCIMAPEANVMDPSLPESINYACSYADCTSLGYGSSCGGLDVKTNASYAFNMYY
QTMNQQKGSCERFHNLSVITTIDPSPSSSSRGSSSSCRFEIMIDVGRHQSRANPGTSSAT
KIKHFSLLFFVLAFVVDYYMSLP

Transcript Sequence

Gene sequence data has not been registered.